Protein ZmGATA28
ZmGATA28 is a protein in the C2C2-GATA family.
Information
TF Name: ZmGATA28
Species: Maize
TF Family: C2C2-GATA
Gene Name(Synonym): GATA28
Uniprot ID: B6STZ1
Subgenome: 2

Protein ZmGATA28

ZmGATA28 is a protein in the C2C2-GATA family.

Overview of domains present in v5 transcripts
PF00320
Zm00001eb391280_T001

Protein-DNA Interactions

Meme Logos for Maize v4 Gene IDs


Gene IDTypeMEME LogoSequenceFIMOPosition
Zm00001d047081DAPseq no logo sequence fimo position
Zm00001d047081DAPseq no logo sequence fimo position
Zm00001d047081ChIPseq no logo sequence fimo position
Zm00001d047081PChIPseq no logo sequence fimo position

Interactions where ZmGATA28 is the regulator


There are no protein-dna interactions that fit this criteria.

Interactions where ZmGATA28 is the target  
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There are 202 protein-dna interactions that fit this criteria. download excel sheet

Zm00001eb391280_T001 from maize genome v5

Amino Acid Sequence
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MIQTEEAAELEWLSKFVDDSYSDMPNYSSATHAAMAAAAAAAANAAGNGGGTTSAGQDSGVAAAPGRGARSRRSRATAAA
AAVWHSLVPRPPSQSSPSSSSCSSSDFPSSNKPARPNGGSRGKKVPGPPGGGPAGGEAGLEGGGVRRCTHCASEKTPQWR
TGPLGPKTLCNACGVRFKSGRLMPEYRPAASPTFVLTQHSNSHRKVMELRRQKELILIRGSHRDAAAGSAAGGPRPELMF
RDYGVC

MIQTEEAAELEWLSKFVDDSYSDMPNYSSATHAAMAAAAAAAANAAGNGGGTTSAGQDSGVAAAPGRGARSRRSRATAAA
AAVWHSLVPRPPSQSSPSSSSCSSSDFPSSNKPARPNGGSRGKKVPGPPGGGPAGGEAGLEGGGVRRCTHCASEKTPQWR
TGPLGPKTLCNACGVRFKSGRLMPEYRPAASPTFVLTQHSNSHRKVMELRRQKELILIRGSHRDAAAGSAAGGPRPELMF
RDYGVC

MIQTEEAAELEWLSKFVDDSYSDMPNYSSATHAAMAAAAAAAANAAGNGGGTTSAGQDSGVAAAPGRGARSRRSRATAAA
AAVWHSLVPRPPSQSSPSSSSCSSSDFPSSNKPARPNGGSRGKKVPGPPGGGPAGGEAGLEGGGVRRCTHCASEKTPQWR
TGPLGPKTLCNACGVRFKSGRLMPEYRPAASPTFVLTQHSNSHRKVMELRRQKELILIRGSHRDAAAGSAAGGPRPELMF
RDYGVC

MIQTEEAAELEWLSKFVDDSYSDMPNYSSATHAAMAAAAAAAANAAGNGGGTTSAGQDSGVAAAPGRGARSRRSRATAAA
AAVWHSLVPRPPSQSSPSSSSCSSSDFPSSNKPARPNGGSRGKKVPGPPGGGPAGGEAGLEGGGVRRCTHCASEKTPQWR
TGPLGPKTLCNACGVRFKSGRLMPEYRPAASPTFVLTQHSNSHRKVMELRRQKELILIRGSHRDAAAGSAAGGPRPELMF
RDYGVC

MIQTEEAAELEWLSKFVDDSYSDMPNYSSATHAAMAAAAAAAANAAGNGGGTTSAGQDSGVAAAPGRGARSRRSRATAAA
AAVWHSLVPRPPSQSSPSSSSCSSSDFPSSNKPARPNGGSRGKKVPGPPGGGPAGGEAGLEGGGVRRCTHCASEKTPQWR
TGPLGPKTLCNACGVRFKSGRLMPEYRPAASPTFVLTQHSNSHRKVMELRRQKELILIRGSHRDAAAGSAAGGPRPELMF
RDYGVC

Secondary Structure Color Code
BEND region with high backbone curvature without specific hydrogen bonding
HELX_LH_PP_P left-handed polyproline helix
HELX_RH_3T_P right-handed 3-10 helix
HELX_RH_AL_P right-handed alpha helix
HELX_RH_PI_P right-handed pi helix
STRN beta strand
TURN_TY1_P type I turn
UNDETERMINED no data available
Domains Present
PF00320
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Nucleotide Sequence
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TAATTACTTCGCAACAACCCCCATC...

GRMZM2G101058_T01 from maize genome v3


Related TFome: pUT3655

Amino Acid Sequence
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MASEWEMAMGVELGMGMGGTYHHNASSITTAPMMMSSHPHSHSGGAASYSTPHHHHYYGGMPPMGDAMRVDDLLDLSTPG
AGAHEFFPTAAPATDKGHHSSGAMGEPSPTANSSDHRTSALSFADEFYIPTEEAAELEWLSKFVDDSYSDMPNYSSATHA
AMAAAAAAAANAAGNGGGTTSAGQDSGVAAAPGRGARSRRSRATAAAAAVWHSLVPRPPSQSSPSSSSCSSSDFPSSNKP
ARPNGGSRGKKVPGPPGGGPAGGEAGLEGGGVRRCTHCASEKTPQWRTGPLGPKTLCNACGVRFKSGRLMPEYRPAASPT
FVLTQHSNSHRKVMELRRQKELILIRGSHRDAAAGSAAGGPRPELMFRDYGVC

Nucleotide Sequence
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GACTGGAGCCCCGAGAGCCCAGCAC...

GRMZM2G101058_T02 from maize genome v3

Amino Acid Sequence
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MASEWEMAMGVELGMGMGGTYHHNASSITTAPMMMSSHPHSHSGGAASYSTPHHHHYYGGMPPMGDAMRVDDLLDLSTPG
AGAHEFFPTAAPATDKGHHSSGAMGEPSPTANSSDHRTSALSFADEFYIPVSTNN

Nucleotide Sequence
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GACTGGAGCCCCGAGAGCCCAGCAC...

Zm00001d047081_T001 from maize genome v4

Amino Acid Sequence
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MASEWEMAMGVELGMGMGGTYHHNASSITTAPMMMSSHPHSHSGGAASYSTPHHHHYYGGMPPMGDAMRVDDLLDLSTPG
AGAHEFFPTAAPATDKGHHSSGAMGEPSPTANSSDHRTSALSFADEFYIPTEEAAELEWLSKFVDDSYSDMPNYSSATHA
AMAAAAAAAANAAGNGGGTTSAGQDSGVAAAPGRGARSRRSRATAAAAAVWHSLVPRPPSQSSPSSSSCSSSDFPSSNKP
ARPNGGSRGKKVPGPPGGGPAGGEAGLEGGGVRRCTHCASEKTPQWRTGPLGPKTLCNACGVRFKSGRLMPEYRPAASPT
FVLTQHSNSHRKVMELRRQKELILIRGSHRDAAAGSAAGGPRPELMFRDYGVC

Nucleotide Sequence
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CTCTCGTCACTCCACTCCAGCCCCT...

Zm00001eb391280_T002 from maize genome v5

Amino Acid Sequence
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MASEWEMAMGVELGMGMGGTYHHNASSITTAPMMMSSHPHSHSGGAASYSTPHHHHYYGGMPPMGDAMRVDDLLDLSTPG
AGAHEFFPTAAPATDKGHHSSGAMGEPSPTANSSDHRTSALSFADEFYIPTEEAAELEWLSKFVDDSYSDMPNYSSATHA
AMAAAAAAAANAAGNGGGTTSAGQDSGVAAAPGRGARSRRSRATAAAAAVWHSLVPRPPSQSSPSSSSCSSSDFPSSNKP
ARPNGGSRGKKVPGPPGGGPAGGEAGLEGGGVRRCTHCASEKTPQWRTGPLGPKTLCNACGVRFKSGRLMPEYRPAASPT
FVLTQHSNSHRKVMELRRQKELILIRGSHRDAAAGSAAGGPRPELMFRDYGVC

Nucleotide Sequence
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TAATTACTTCGCAACAACCCCCATC...

Zm00001eb391280_T003 from maize genome v5

Amino Acid Sequence
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MASEWEMAMGVELGMGMGGTYHHNASSITTAPMMMSSHPHSHSGGAASYSTPHHHHYYGGMPPMGDAMRVDDLLDLSTPG
AGAHEFFPTAAPATDKGHHSSGAMGEPSPTANSSDHRTSALSFADEFYIPTEEAAELEWLSKFVDDSYSDMPNYSSATHA
AMAAAAAAAANAAGNGGGTTSAGQDSGVAAAPGRGARSRRSRATAAAAAVWHSLVPRPPSQSSPSSSSCSSSDFPSSNKP
GGRRRAAVHALRVGEDAAVEDGAAGPQDPLQRVRRAVQVRAADARVPAGGQPHLRAHAALQLAPQGHGAAPPEGAHPHPR
KPPRRRRRIRRRRAEAGAHVP

Nucleotide Sequence
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CCAGCACTATTTCTTCCCCCGTCGT...


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